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Prof. Süreyya Akyüz

Bahçeşehir University, Faculty of Engineering and Natural Sciences

Mathematics Department

JOURNAL

  1. Akyüz, A., T. Yurdun, Z. Pelin, S. Özöğür and O. Ercan, Serum Copper and Zinc Status in Obstructive Sleep Apnea Patients, Journal of Sleep Research, published on behalf of the European Sleep Research Society September 2006 - Vol. 15 Issue s1 Page v-281. (Abstract Published in Refereed SCI indexed Journal)
  2. G.-W. Weber, P. Taylan, Z. Alparslan-Gök, S. Özöğür-Akyüz and B. Akteke-Öztürk, Optimization of gene-environment networks in the presence of errors and uncertainty with Chebychev approximation, in TOP, the Operational Research journal of SEIO (Spanish Statistics and Operations Research Society) 16, 2 (2008) 284-318.
  3. S. Özöğür, J. Shawe-Taylor, G.-W. Weber and Z.B. Ögel, Pattern Analysis for the Prediction of Eukoryatic Pro-peptide Cleavage Sites, Discrete Applied Mathematics (DAM), Volume 157, Issue 10, 28 May 2009, pp. 2388-2394
  4. G.-W. Weber, S. Özöğür -Akyüz and E. Kropat, A review on data mining and continuous optimization applications in computational biology and medicine, in Embryo Today, Birth Defects Research (Part C) 87 (2009) pp.165-181
  5. S. Özöğür-Akyüz, and G.-W. Weber, Infinite Kernel Learning via infinite and semi-infinite programming, in the special issue of OMS (Optimization Methods and Software) at the occasion of International Conference on Engineering Optimization (EngOpt 2008; Rio de Janeiro, Brazil, June 1-5, 2008), K. Schittkowski (guest ed.), Volume 25 Issue 6, pp. 937-970, 2010
  6. S. Özöğür-Akyüz, and G.-W. Weber, On Numerical Optimization theory of Infinite Kernel
  7. Learning, Journal of Global Optimization, 48, Issue 2 (2010), Page 215 -239, 2010.
  8. G. Üstünkar, S. Özöğür-Akyüz, G.-W. Weber, Y. Aydın Son, C. M, Friedrich, Selection of Representative SNP Sets for Genome-Wide Association Studies: A Metaheuristic Approach, Optimization Letters, 6, pp: 1207–1218, 2012
  9. Özöğür-Akyüz, S, Windeatt, T., Smith, R., Pruning of Error Correcting Output Code by Optimization of Accuracy-Diversity Trade off, in Machine Learning, Volume 101, Issue 1, pp 253-269, 2015
  10. Özöğür-Akyüz, S. , Üstünkar, G., Weber, G.-W., Infinite Kernel Learning by Multi-Local Algorithm, in International Journal of Pattern Recognition and Artificial Intelligence (IJPRAI), Vol. 30, No. 4 (2016) 1651004 (21 pages) Doi: 10.1142/S0218001416510046

CONFERENCE PAPER

  1. S. Özöğür, A.G. Sağdıçoğlu Celep, B. Karasözen, N. Yıldırım and G.-W. Weber, Dynamical modelling of enzymatic reactions, simulation and parameter estimation with genetic algorithms. In: HIBIT proceedings of International Symposium on Health Informatics and Bioinformatics, Turkey’05, Antalya, Turkey, November, 2005, pp. 78–84
  2. S. Özöğür, G.-W. Weber and J. Shawe-Taylor, Biological Data Mining by Using SVM and Pattern Analysis, in EURO XXI, 21st European Conference on Operational Research, Iceland, 2-5 July 2006, pp. 49 (abstract).
  3. A. Akyüz, T. Yurdun, Z. Pelin, S. Özöğür and O. Ercan, Serum Copper and Zinc Status in Obstructive Sleep Apnea Patients, (poster) in 8th Congress of the European Sleep Research Society, Innsbruck, Austria, September 12-16, 2006
  4. S. Özöğür, Z. Hussain, and J. Shawe-Taylor, Model Selection via Test Margin, in EURO XXII European Conference on Operational Research, Prague, July, 2007, pp. 236 (abstract).
  5. A. Akyüz, T. Yurdun, Z. Pelin and S. Özöğür, Serum Zinc and Copper Level Determination in Obstructive Sleep Apnea Patients, in 6th IC-TST; 6th International Congress of Turkish Society of Toxicology “Chemical Safety and Toxicology”, Antalya, Turkey, 2-5 November, 2006, pp. 140 (abstract).
  6. G.-W. Weber, P. Taylan, S. Özöğür and B. Akteke-Öztürk, Statistical learning and optimization methods in data mining, in: Recent Advances in Statistics, eds.: H.Ö. Ayhan and I. Batmaz, Turkish Statistical Institute Press, Ankara, at the occasion of “Graduate Summer School on New Advances in Statistics” (August 2007) 181-195.
  7. S. Özöğür-Akyüz and G.-W. Weber, Learning with Infinitely Many Kernels via Semi- Infinite Programming, In ISI Proceedings of Euro Mini Conference on Continuous Optimization and Knowledge Based Technologies, ISBN: 978-9955-28-283-9,Vilnius Gediminas Technical University Publishing House “Technika”, 2008, pp. 342- 348.
  8. S. Özöğür-Akyüz, A.Ö. Argunşah, A. Akyüz and T. Windeatt, Sleep Stage Classification using ECOC, (poster) in 4th International Symposium on Health Informatics and Bioinformatics (HIBIT), Ankara, Turkey, April 16-17, 2009.
  9. S. Özöğür-Akyüz and G.-W. Weber, Infinite kernel learning by infinite and semi-infinite programming, Proceedings of the Second Global Conference on Power Control and Optimization, AIP Conference Proceedings 1159, Conference Location and Date: Bali, Indonesia, 1-3 June 2009, Subseries: Mathematical and Statistical Physics; ISBN 978-0- 7354-0696-4 (August 2009) 306-313; A.H. Hakim, P. Vasant and N. Barsoum, guest eds
  10. S. Özöğür-Akyüz and T. Windeatt, On New Model Selection Methods for Error Correcting Output Codes (ECOC), in 23rd European Conference on Operational Research, in session “Multi-View Learning in Machine Learning”, Bonn, Germany, July 5-8, 2009, pp. 275 (abstract).
  11. B. Kaymakoğlu, A. Akyüz, S. Özöğür-Akyüz, N. Baykal and F. Özgen, Data Mining and Knowledge Discovery studies in psychophysiological and paradoxical sleep apnea patients, in 23rd European Conference on Operational Research, in session “Data Mining and Healthcare Informatics”, Bonn, Germany, July 5-8, 2009, pp. 298 (abstract).
  12. Unay, D., Soldea, O., Ozogur-Akyuz, S., Cetin, M., Ercil, A., “Medical Image Retrieval and Automatic Annotation: VPA-SABANCI at ImageCLEF 2009”, Proc. of Cross-Language Evaluation Forum (CLEF) Workshop in conjunction with ECDL’09, Corfu - Greece, 2009.
  13. G. Üstünkar, S. Özöğür-Akyüz, U. Sezerman, G.-W. Weber and N. Baykal, Application of Advanced Machine Learning Methods For SNP Discovery in Complex Disease Association Studies, in Proceedings of International Congress on Computational and Applied Mathematics (ICCAM), Antalya, September 2009 (abstract).
  14. . S. Özöğür-Akyüz, G. Üstünkar and G.-W. Weber, On Numerical Optimization Methods for Infinite Kernel Learning, in Proceedings of International Congress on Computational and Applied Mathematics (ICCAM), Antalya, September 2009 (abstract).
  15. G. Üstünkar, S. Özöğür -Akyüz and G.-W. Weber, SNP-Complex Disease Association by Simulated Annealing Approach, extended abstract, 8th International Conference on Optimization: Techniques and Applications (ICOTA8), Shanghai, China, December 10-13, 2010.
  16. U. Akyüz, O. Yazici, O. Kilic, G. Akturk, E. Mert, B. Uzunlu, B. Ozturk, S. Ozogur-Akyuz, Online web based solution for environmental sustainable development, In Proceedings of 24th European Conference on Operational Research (EURO XXI), pp 14, 2010.
  17. G. Üstünkar, S. Özöğür-Akyüz, G.W-Weber, N. Baykal, Application of advanced machine learning methods for tag snp selection in complex disease association studies, In Proceedings of 24th European Conference on Operational Research (EURO XXI), pp 35, 2010.
  18. S. Özöğür-Akyüz, G.W.-Weber, Adapted Infinite Kernel Learning by Multi-Local Algorithm, In Proceedings of 24th European Conference on Operational Research (EURO XXI), pp. 78, 2010
  19. S.Özöğür-Akyüz, A. Kaygun, İ. Karaduman, A novel graph theoretical approach for reconstruction of signalling pathways by genetic algorithm, In Proceedings of European Chapter on Combinatorial Optimization ECCO 2012, pp.6, Antalya, 2012.
  20. S. Özöğür-Akyüz, T. Windeatt, Ensemble Pruning via DC Programming, R. Smith, In Proceedings of 24th European Conference on Operational Research (EURO XXV), pp149, Vilnius, Lithuania, 2012.
  21. S. Özöğür-Akyüz, T.Windeatt, Learning Weights of Multiple Kernels by Genetic Algorithm: integrated with ECOC, EURO, INFORMS 26th Conference on Operational Research, pp. 27, Rome, Italy, 2013.
  22. S. Özöğür-Akyüz, G. Seichanouglu, Maximum Margin Multiple Kernel Clustering by Semi- infinite Optimization, 20th Conference of the International Federation of Operational Research Societies (IFORS), Barcelona, 2014.
  23. S.Özöğür-Akyüz, Ensemble Clustering Selection by Optimization of Accuracy-Diversity Trade off, In Proceedings of 28th European Conference on Operational Research (EURO XXVIII), pp: Poznan, Poland
  24. B. Eygi Erdoğan, S. Özöğür-Akyüz, Ensemble Learning by Two Step-Margin Based Model Selection: Case Study on Bankruptcy Data in Turkish Commercial Banks, In Proceedings of International Conference On Trends And Perspectives In Linear Statistical Inference, LINSTAT 2016, Istanbul, Turkey
  25. B. Eygi Erdoğan, S. Özöğür- Akyüz, Clustered Support Vector Regression: House Price Prediction Case Study, In Proceedings of Xth International Statistics Days Conference, Giresun, Turkey, 2016

BOOK

  1. S. Özöğür-Akyüz, Mathematical Modeling of Enzymatic Reactions: Simulation and Parameter Estimation by Genetic Algorithm, VDM Verlag Dr. Müller Aktiengesellschaft & Co. KG, Saarbrücken, Germany, 2009.
  2. S. Özöğür-Akyüz, Infinite Kernel Learning by Semi-infinte Optimization: Integrated with New Model Selection Algorithm, LAP LAMBERT Academic Publishing, ISBN-13: 978- 3845434988, 2011

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